Basic Information
Locus ID:
gene:ENSEOMG00000033712
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 25 | 947523 | 949133 | + | gene:ENSEOMG00000033712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 42,700.66 Da | 51.40 | 94.05 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 34 | 111 | 3.6E-5 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 192 | 321 | 6.9E-18 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 180 | 321 | 7.06E-22 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 28 | 171 | 9.03E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 171 | 321 | 3.0E-14 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 22 | 169 | 1.8E-11 | IPR036378 |
| SMART | SM00554 | fasc_3 | 218 | 322 | 2.8E-15 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 22 | 169 | 11.18565 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 180 | 319 | 17.153559 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 364 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10. | 0 |
| RefSeq | XP_021748067.1 | fasciclin-like arabinogalactan protein 10 [Chenopodium quinoa] | 0 |
| Q9LZX4 | Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KYX5 | Fasciclin-like arabinogalactan protein 8 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology