Basic Information
Locus ID:
gene:ENSEOMG00000029895
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 23 | 25470996 | 25472912 | + | gene:ENSEOMG00000029895 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 48,923.46 Da | 45.33 | 101.10 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 95 | 330 | 7.06E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 13 | 380 | 2.1E-14 | IPR032675 |
| Coils | Coil | Coil | 428 | 429 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021761777.1 | uncharacterized protein LOC110726612 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A484NH86 | F-box domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS42085 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 7 | Ah023203, Ah023944, Ah028596, Ah028601, Ah028833, Ah035632 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019563 |
| Amaranthaceae | Chenopodium album | 8 | gene:ENSEOMG00000009927, gene:ENSEOMG00000016680 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2AG0017870 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18895 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132613385, gene-LOC132622071, gene-LOC132636488 |