Basic Information
Locus ID:
gene:ENSEOMG00000029602
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 22 | 2587612 | 2588610 | - | gene:ENSEOMG00000029602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 35,070.85 Da | 72.03 | 52.32 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 181 | 222 | 1.27623E-24 | - |
| Pfam | PF14369 | zinc-ribbon | 6 | 37 | 7.5E-11 | IPR039525 |
| Pfam | PF13639 | Ring finger domain | 180 | 222 | 4.6E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 161 | 229 | 1.92E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 145 | 228 | 8.9E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 181 | 221 | 1.2E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 181 | 222 | 12.208971 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 301 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40830.1 | RING-H2 finger C1A. Encodes a putative RING-H2 finger protein RHC1a. | 0 |
| RefSeq | XP_021772245.1 | probable E3 ubiquitin-protein ligase RHC1A [Chenopodium quinoa] | 0 |
| O22197 | Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KMI6 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology