Basic Information
Locus ID:
gene:ENSEOMG00000029280
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 21 | 11890201 | 11892201 | - | gene:ENSEOMG00000029280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 51,139.21 Da | 33.05 | 87.22 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 58 | 3.6E-8 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 245 | 360 | 1.6E-9 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 70 | 2.62E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 71 | 1.4E-5 | - |
| SMART | SM00256 | fbox_2 | 22 | 62 | 1.6E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 128 | 322 | 1.3E-29 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 63 | 10.159829 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19940.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021772466.1 | putative F-box protein At3g10790 [Chenopodium quinoa] | 0 |
| O49421 | F-box protein At4g19940 OS=Arabidopsis thaliana OX=3702 GN=At4g19940 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803L7D3 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah026116 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g140770 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12802, Sbi_jg53088 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8786 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026943 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl34072, Sgl34296, Sgl39698 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001075, gene:ENSEOMG00000003759 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0015700, CQ.Regalona.r1.6BG0016560 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G23433 |