Basic Information
Locus ID:
gene:ENSEOMG00000027778
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 22 | 34292655 | 34297660 | - | gene:ENSEOMG00000027778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 89,094.27 Da | 53.52 | 81.96 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 665 | 700 | 7.9E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 582 | 616 | 4.1E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 491 | 802 | 1.55E-53 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 290 | 1.02E-20 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 469 | 805 | 4.8E-121 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 93 | 294 | 3.8E-25 | - |
| SMART | SM00320 | WD40_4 | 576 | 616 | 1.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 534 | 573 | 29.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 662 | 700 | 8.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 619 | 658 | 0.79 | IPR001680 |
| SMART | SM00320 | WD40_4 | 488 | 523 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 759 | 803 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 709 | 748 | 4.5 | IPR001680 |
| SMART | SM00220 | serkin_6 | 42 | 284 | 2.1E-4 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 583 | 620 | 10.706503 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 669 | 702 | 10.521959 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 583 | 625 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 669 | 702 | 12.647216 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 284 | 11.877521 | IPR000719 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 687 | 701 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 603 | 617 | 5.1E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 687 | 701 | 5.1E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 560 | 574 | 5.1E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| Coils | Coil | Coil | 297 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_021722829.1 | protein SPA1-RELATED 4-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LVC8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology