Basic Information
Locus ID:
gene:ENSEOMG00000027441
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 22 | 21750583 | 21755739 | - | gene:ENSEOMG00000027441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 20,682.42 Da | 49.33 | 58.74 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00201 | WW | 17 | 46 | 0.00121148 | IPR001202 |
| Pfam | PF00397 | WW domain | 16 | 46 | 1.0E-6 | IPR001202 |
| SUPERFAMILY | SSF51045 | WW domain | 8 | 49 | 4.93E-9 | IPR036020 |
| Gene3D | G3DSA:2.20.70.10 | - | 6 | 56 | 2.0E-6 | - |
| SMART | SM00456 | ww_5 | 15 | 48 | 3.1E-5 | IPR001202 |
| ProSiteProfiles | PS50020 | WW/rsp5/WWP domain profile. | 14 | 48 | 11.0338 | IPR001202 |
| ProSitePatterns | PS01159 | WW/rsp5/WWP domain signature. | 20 | 46 | - | IPR001202 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 79 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14610.1 | DEAD box RNA helicase family protein. | 0 |
| RefSeq | XP_021733054.1 | ATP-dependent RNA helicase-like protein DB10 [Chenopodium quinoa] | 0 |
| P46942 | ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MUF8 | DEAD-box ATP-dependent RNA helicase 46 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology