Basic Information
Locus ID:
gene:ENSEOMG00000027397
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc finger, C3HC4 type family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 21 | 3651282 | 3658061 | - | gene:ENSEOMG00000027397 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 36,684.60 Da | 46.68 | 94.86 | 0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 36 | 84 | 4.5325E-16 | - |
| Pfam | PF12906 | RING-variant domain | 36 | 83 | 4.8E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 31 | 88 | 2.71E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 96 | 6.4E-18 | IPR013083 |
| SMART | SM00744 | ringv_2 | 35 | 84 | 1.1E-16 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 28 | 90 | 20.699759 | IPR011016 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22120.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_021751969.1 | uncharacterized protein LOC110717549 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803KSN7 | RING-CH-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology