Basic Information
Locus ID:
gene:ENSEOMG00000027283
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 39400427 | 39403256 | - | gene:ENSEOMG00000027283 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 62,950.93 Da | 54.35 | 66.59 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16623 | RING-HC_RBR_TRIAD1_like | 150 | 200 | 8.66446E-15 | - |
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 302 | 345 | 1.2E-7 | IPR002867 |
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 219 | 281 | 2.7E-15 | IPR002867 |
| SUPERFAMILY | SSF57850 | RING/U-box | 300 | 348 | 3.35E-16 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 145 | 231 | 2.97E-15 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 219 | 288 | 1.47E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 144 | 229 | 1.3E-15 | IPR013083 |
| Gene3D | G3DSA:1.20.120.1750 | - | 277 | 524 | 2.3E-73 | - |
| SMART | SM00647 | ibrneu5 | 285 | 355 | 0.62 | IPR002867 |
| SMART | SM00647 | ibrneu5 | 219 | 281 | 1.2E-19 | IPR002867 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 150 | 196 | 8.609239 | IPR001841 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 146 | 359 | 44.820953 | IPR044066 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 40 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31510.2 | - | 0 |
| RefSeq | XP_021764388.1 | probable E3 ubiquitin-protein ligase ARI7 [Chenopodium quinoa] | 0 |
| Q84RR0 | Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana OX=3702 GN=ARI7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MFJ5 | RBR-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology