Basic Information
Locus ID:
gene:ENSEOMG00000026994
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 22 | 2235217 | 2247054 | - | gene:ENSEOMG00000026994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 91,708.37 Da | 49.85 | 79.17 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 164 | 276 | 2.98242E-17 | - |
| CDD | cd00821 | PH | 10 | 105 | 1.45942E-11 | - |
| Pfam | PF00169 | PH domain | 9 | 113 | 8.2E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 164 | 223 | 1.0E-5 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 561 | 649 | 2.0E-16 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 246 | 283 | 1.2E-5 | IPR000198 |
| SUPERFAMILY | SSF50729 | PH domain-like | 7 | 113 | 2.74E-17 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 164 | 333 | 2.16E-20 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 232 | 340 | 1.6E-10 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 6 | 116 | 1.4E-16 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 137 | 227 | 5.7E-8 | IPR008936 |
| SMART | SM00233 | PH_update | 8 | 116 | 8.9E-16 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 161 | 327 | 8.0E-7 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 7 | 114 | 15.458 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 741 | - | - |
| Coils | Coil | Coil | 551 | 592 | - | - |
| Coils | Coil | Coil | 618 | 652 | - | - |
| Coils | Coil | Coil | 184 | 204 | - | - |
| Coils | Coil | Coil | 780 | 807 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_021734234.1 | rho GTPase-activating protein 7-like [Chenopodium quinoa] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L3V6 | Rho GTPase-activating protein 7-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology