Basic Information
Locus ID:
gene:ENSEOMG00000026829
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 18012383 | 18014023 | - | gene:ENSEOMG00000026829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 32,211.80 Da | 66.46 | 65.71 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 106 | 147 | 7.66634E-23 | - |
| Pfam | PF14369 | zinc-ribbon | 7 | 37 | 1.3E-12 | IPR039525 |
| Pfam | PF06547 | Protein of unknown function (DUF1117) | 175 | 273 | 4.0E-30 | IPR010543 |
| Pfam | PF13639 | Ring finger domain | 105 | 147 | 4.5E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 86 | 153 | 1.08E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 153 | 1.5E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 106 | 146 | 1.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 106 | 147 | 11.854899 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59550.1 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_021744046.1 | E3 ubiquitin-protein ligase RDUF2-like [Chenopodium quinoa] | 0 |
| Q940T5 | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N933 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology