HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000026618
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: DUF4210
Maps and Mapping Data
Chromosome Start End Strand ID
20 30160196 30165365 + gene:ENSEOMG00000026618
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.67 61,927.05 Da 47.63 76.15 -0.42
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13915 Domain of unknown function (DUF4210) 329 371 1.9E-5 IPR025261
SMART SM01177 DUF4210_2 329 388 3.5E-20 IPR025261
Best hit
Source Best Hit ID Description E-value
TAIR AT5G41110.1 0
RefSeq XP_021775792.1 uncharacterized protein LOC110739652 [Chenopodium quinoa] 0
Swiss-Prot Q5RBA3 Atos homolog protein B OS=Pongo abelii OX=9601 GN=ATOSB PE=2 SV=1 0
TrEMBL A0A0K9QJ31 DUF4210 domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_179640 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg13402, jg27070
Aizoaceae Mesembryanthemum crystallinum 3 gene_13978, gene_25025, gene_4101
Amaranthaceae Atriplex hortensis 1 Ah026887
Amaranthaceae Beta vulgaris 3 BVRB_5g112990, BVRB_6g130860, BVRB_6g130880
Amaranthaceae Salicornia bigelovii 4 Sbi_jg13671, Sbi_jg30806, Sbi_jg52231, Sbi_jg58461
Amaranthaceae Salicornia europaea 2 Seu_jg28331, Seu_jg9614
Amaranthaceae Suaeda aralocaspica 2 GOSA_00004905, GOSA_00017640
Amaranthaceae Suaeda glauca 4 Sgl33461, Sgl38828, Sgl53731, Sgl58996
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000003192, gene:ENSEOMG00000003355 ...
gene:ENSEOMG00000006458, gene:ENSEOMG00000020855, gene:ENSEOMG00000025761, gene:ENSEOMG00000026618
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.5AG0017650, CQ.Regalona.r1.5BG0018830 ...
CQ.Regalona.r1.6AG0020340, CQ.Regalona.r1.6BG0021410
Anacardiaceae Pistacia vera 2 pistato.v30012350, pistato.v30025210
Apiaceae Apium graveolens 3 Ag3G01952, Ag5G00777, Ag6G01497
Arecaceae Cocos nucifera 3 COCNU_02G009330, COCNU_02G009340, COCNU_11G003500
Arecaceae Phoenix dactylifera 2 gene-LOC103707826, gene-LOC103715320
Asparagaceae Asparagus officinalis 1 AsparagusV1_04.1526.V1.1
Asteraceae Flaveria trinervia 2 Ftri17G20134, Ftri18G20286
Brassicaceae Arabidopsis thaliana 2 AT3G26890.1, AT5G41110.1
Brassicaceae Eutrema salsugineum 2 Thhalv10003798m.g.v1.0, Thhalv10027694m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp2g16010.v2.2, Sp7g00790.v2.2
Brassicaceae Brassica nigra 2 BniB02g067090.2N, BniB04g007660.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq08G0069
Casuarinaceae Casuarina glauca 2 Cgl01G2137, Cgl08G0075
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno07g03350
Hydrocharitaceae Thalassia testudinum 1 gene.Thate05g10070
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-10388
Nitrariaceae Nitraria sibirica 2 evm.TU.LG05.587, evm.TU.LG05.92
Plantaginaceae Plantago ovata 2 Pov_00024312, Pov_00033528
Plumbaginaceae Limonium bicolor 2 Lb2G15219, Lb5G27077
Poaceae Echinochloa crus-galli 6 AH03.2538, AH08.2202, BH03.2688, BH08.2333, CH03.2892 ...
CH08.2503
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0494880.1, HORVU.MOREX.r3.7HG0684880.1
Poaceae Lolium multiflorum 3 gene-QYE76_006502, gene-QYE76_006506, gene-QYE76_030333
Poaceae Oryza coarctata 4 Oco15G009770, Oco16G012670, Oco17G009020, Oco18G009130
Poaceae Oryza sativa 2 LOC_Os08g42420.1, LOC_Os09g33520.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G236600, gene-BS78_07G205900
Poaceae Puccinellia tenuiflora 3 Pt_Chr0403566, Pt_Chr0701358, Pt_Chr0701376
Poaceae Sporobolus alterniflorus 4 Chr10G015330, Chr11G006990, Chr20G000930, Chr29G001260
Poaceae Thinopyrum elongatum 3 Tel5E01G466400, Tel5E01G466500, Tel7E01G461700
Poaceae Triticum dicoccoides 5 gene_TRIDC1AG003780, gene_TRIDC5AG043670 ...
gene_TRIDC5BG047700, gene_TRIDC7AG034320, gene_TRIDC7BG025480
Poaceae Triticum aestivum 6 TraesCS5A02G291800.1, TraesCS5B02G290900.4 ...
TraesCS5D02G299200.3, TraesCS7A02G263400.4, TraesCS7B02G161200.1, TraesCS7D02G264000.1
Poaceae Zea mays 3 Zm00001eb036950_P001, Zm00001eb280240_P001 ...
Zm00001eb317930_P004
Poaceae Zoysia japonica 2 nbis-gene-17537, nbis-gene-19387
Poaceae Zoysia macrostachya 2 Zma_g24445, Zma_g32861
Portulacaceae Portulaca oleracea 5 evm.TU.LG01.2758, evm.TU.LG02.179, evm.TU.LG03.2307 ...
evm.TU.LG09.1417, evm.TU.LG17.1356
Posidoniaceae Posidonia oceanica 1 gene.Posoc05g13710
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_11_RagTag.1170, evm.TU.Scaffold_4_RagTag.319 ...
evm.TU.Scaffold_4_RagTag.846
Rhizophoraceae Carallia pectinifolia 3 nbisL1-mrna-12366, nbisL1-mrna-12479, nbisL1-mrna-28505
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-18683, nbisL1-mrna-6921
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-12745, nbisL1-mrna-1987
Rhizophoraceae Kandelia candel 4 add.evm.TU.utg000008l.205, evm.TU.utg000008l.202 ...
evm.TU.utg000008l.542, evm.TU.utg000010l.233
Rhizophoraceae Kandelia obovata 3 Maker00001009, Maker00001103, Maker00008683
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-14363, nbisL1-mrna-14705, nbisL1-mrna-632
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-1324, nbisL1-mrna-19329, nbisL1-mrna-8818
Salicaceae Populus euphratica 3 populus_peu01290, populus_peu28924, populus_peu30318
Solanaceae Lycium barbarum 1 gene-LOC132632318
Solanaceae Solanum chilense 1 SOLCI007161100
Solanaceae Solanum pennellii 1 gene-LOC107014550
Tamaricaceae Reaumuria soongarica 2 STRG.13955_chr05_+, gene_259
Tamaricaceae Tamarix chinensis 2 TC01G3417, TC03G1118
Zosteraceae Zostera marina 1 Zosma02g01500.v3.1
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