Basic Information
Locus ID:
gene:ENSEOMG00000026516
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
PDC1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 10829819 | 10831878 | + | gene:ENSEOMG00000026516 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 31,580.86 Da | 23.28 | 88.24 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 122 | 266 | 2.9593E-78 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 167 | 230 | 4.3E-13 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 2 | 74 | 2.9E-9 | IPR012000 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 2 | 99 | 8.0E-19 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 122 | 256 | 5.0E-35 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 1 | 109 | 2.9E-27 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 116 | 274 | 1.9E-46 | - |
| ProSitePatterns | PS00187 | Thiamine pyrophosphate enzymes signature. | 181 | 200 | - | IPR000399 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_021753882.1 | pyruvate decarboxylase 2 [Chenopodium quinoa] | 0 |
| P51851 | Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum OX=3888 GN=PDC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QMI0 | pyruvate decarboxylase OS=Spinacia oleracea OX=3562 GN=SOVF_162420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology