Basic Information
Locus ID:
gene:ENSEOMG00000026160
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 36058565 | 36064248 | - | gene:ENSEOMG00000026160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 39,203.86 Da | 56.26 | 64.17 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 239 | 281 | 1.64759E-16 | - |
| Pfam | PF13639 | Ring finger domain | 237 | 280 | 1.1E-8 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 286 | 343 | 2.3E-22 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 109 | 184 | 3.5E-17 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 103 | 165 | 6.15E-18 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 175 | 232 | 4.18E-17 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 238 | 286 | 6.1E-9 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 310 | 345 | 6.1E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 232 | 283 | 4.8E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 239 | 280 | 2.9E-5 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 102 | 171 | 23.392311 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 239 | 281 | 11.648357 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 174 | 238 | 27.115389 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18910.1 | zinc ion binding;zinc ion binding. | 0 |
| RefSeq | XP_021761697.1 | zinc finger protein BRUTUS-like At1g18910 isoform X3 [Chenopodium quinoa] | 0 |
| F4IDY5 | Zinc finger protein BRUTUS-like At1g18910 OS=Arabidopsis thaliana OX=3702 GN=At1g18910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M1C4 | GCFC domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology