Basic Information
Locus ID:
gene:ENSEOMG00000025834
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 21 | 14167846 | 14181894 | - | gene:ENSEOMG00000025834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 131,987.80 Da | 52.69 | 79.10 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 249 | 377 | 3.46941E-18 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1057 | 1100 | 7.89874E-16 | - |
| CDD | cd12108 | Hr-like | 52 | 178 | 2.57207E-29 | - |
| CDD | cd12108 | Hr-like | 598 | 754 | 1.10151E-28 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 54 | 180 | 4.5E-12 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 247 | 379 | 2.2E-6 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1105 | 1162 | 2.6E-24 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 929 | 1004 | 1.0E-17 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 1057 | 1099 | 2.6E-6 | IPR001841 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 594 | 755 | 3.3E-9 | IPR012312 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 920 | 985 | 1.7E-15 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1057 | 1103 | 4.86E-7 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 995 | 1051 | 6.8E-16 | IPR037275 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 48 | 198 | 4.1E-32 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 590 | 820 | 3.7E-26 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1051 | 1102 | 5.7E-9 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 1129 | 1170 | 2.3E-18 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 248 | 396 | 1.4E-20 | - |
| SMART | SM00184 | ring_2 | 1058 | 1099 | 5.9E-6 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 994 | 1057 | 29.743618 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1058 | 1100 | 11.205767 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 922 | 991 | 25.642509 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_021753475.1 | zinc finger protein BRUTUS-like [Chenopodium quinoa] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KUY2 | Zinc finger protein BRUTUS OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology