Basic Information
Locus ID:
gene:ENSEOMG00000025028
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 1867055 | 1876609 | + | gene:ENSEOMG00000025028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.58 | 32,880.64 Da | 43.29 | 82.87 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01763 | Ubl_SUMO_like | 37 | 113 | 1.18015E-11 | - |
| CDD | cd01763 | Ubl_SUMO_like | 212 | 280 | 8.47244E-10 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 54 | 110 | 2.8E-5 | IPR022617 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 213 | 280 | 1.0E-11 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 117 | 195 | 3.7E-9 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 211 | 288 | 2.34E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 22 | 114 | 8.12E-10 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 209 | 288 | 2.8E-13 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 125 | 198 | 1.2E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 27 | 118 | 7.1E-16 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 211 | 289 | 9.961455 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021765589.1 | uncharacterized protein LOC110730122 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LTV5 | Ubiquitin-like domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_2153, gene_2154 |
| Amaranthaceae | Atriplex hortensis | 6 | Ah004369, Ah004371, Ah004372, Ah004373, Ah004402, Ah012689 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl51245, Sgl56548 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000024781, gene:ENSEOMG00000025028 |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.5AG0001770, CQ.Regalona.r1.5AG0001780 ... |