Basic Information
Locus ID:
gene:ENSEOMG00000024753
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 39405092 | 39407920 | - | gene:ENSEOMG00000024753 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 57,654.14 Da | 36.76 | 79.33 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01485 | IBR domain, a half RING-finger domain | 162 | 228 | 2.3E-12 | IPR002867 |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 92 | 124 | 2.7E-5 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 91 | 171 | 9.13E-17 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 176 | 235 | 1.94E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 247 | 298 | 1.29E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 174 | 3.7E-15 | IPR013083 |
| Gene3D | G3DSA:1.20.120.1750 | - | 224 | 489 | 1.3E-60 | - |
| SMART | SM00647 | ibrneu5 | 162 | 228 | 6.6E-18 | IPR002867 |
| SMART | SM00647 | ibrneu5 | 232 | 298 | 0.52 | IPR002867 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 92 | 142 | 10.379599 | IPR001841 |
| ProSiteProfiles | PS51873 | TRIAD supradomain profile. | 88 | 302 | 36.691101 | IPR044066 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31510.3 | - | 0 |
| RefSeq | XP_021762673.1 | probable E3 ubiquitin-protein ligase ARI7 [Chenopodium quinoa] | 0 |
| Q84RR0 | Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana OX=3702 GN=ARI7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MFJ4 | RBR-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology