Basic Information
Locus ID:
gene:ENSEOMG00000024703
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 1060919 | 1067456 | - | gene:ENSEOMG00000024703 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 32,125.65 Da | 44.41 | 86.21 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00570 | HRDC domain | 185 | 245 | 1.3E-8 | IPR002121 |
| Pfam | PF16124 | RecQ zinc-binding | 11 | 54 | 1.6E-9 | IPR032284 |
| SUPERFAMILY | SSF47819 | HRDC-like | 173 | 257 | 1.0E-6 | IPR010997 |
| Gene3D | G3DSA:1.10.10.10 | - | 60 | 160 | 1.2E-24 | IPR036388 |
| Gene3D | G3DSA:1.10.150.80 | HRDC domain | 178 | 248 | 4.1E-12 | IPR044876 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 57 | 1.8E-5 | IPR027417 |
| ProSiteProfiles | PS50967 | HRDC domain profile. | 176 | 255 | 12.195068 | IPR002121 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31360.2 | RECQ helicase L2. Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro. | 0 |
| RefSeq | XP_021725557.1 | mediator of RNA polymerase II transcription subunit 34-like [Chenopodium quinoa] | 0 |
| Q9FT73 | ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MCW2 | ATP-dependent DNA helicase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology