Basic Information
Locus ID:
gene:ENSEOMG00000024032
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 20 | 5836981 | 5844725 | + | gene:ENSEOMG00000024032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 115,427.55 Da | 42.92 | 77.52 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 814 | 852 | 0.034 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 905 | 936 | 0.088 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 726 | 1041 | 1.83E-50 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 543 | 1.01E-13 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 702 | 1044 | 1.5E-124 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 287 | 548 | 1.0E-16 | - |
| SMART | SM00320 | WD40_4 | 898 | 936 | 7.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 770 | 809 | 0.06 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1003 | 1042 | 31.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 720 | 759 | 0.031 | IPR001680 |
| SMART | SM00320 | WD40_4 | 855 | 894 | 0.04 | IPR001680 |
| SMART | SM00320 | WD40_4 | 812 | 852 | 1.1E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 947 | 986 | 160.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 819 | 861 | 10.107432 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 905 | 938 | 10.548323 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 905 | 945 | 13.081652 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 776 | 818 | 9.238559 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 923 | 937 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 796 | 810 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 839 | 853 | 5.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 923 | 937 | 5.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 796 | 810 | 5.5E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_021754309.1 | protein SPA1-RELATED 2-like [Chenopodium quinoa] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LWF1 | Protein SPA1-RELATED 2-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology