HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000023493
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
20 5798265 5801199 - gene:ENSEOMG00000023493
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.95 79,856.38 Da 41.96 82.52 -0.92
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Gene3D G3DSA:1.10.287.1490 - 235 400 1.9E-7 -
Coils Coil Coil 5 34 - -
Coils Coil Coil 456 476 - -
Coils Coil Coil 412 439 - -
Coils Coil Coil 331 393 - -
Coils Coil Coil 254 295 - -
Coils Coil Coil 102 171 - -
Coils Coil Coil 179 206 - -
KEGG Pathway
KO Term:
K20283 (golgin subfamily A member 4)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G41780.1 myosin heavy chain-related. 0
RefSeq XP_021754317.1 myosin-11-like [Chenopodium quinoa] 0
TrEMBL A0A803LWF6 NAB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg23535, jg37040, jg4738, jg4739, jg7681
Aizoaceae Mesembryanthemum crystallinum 1 gene_1777
Amaranthaceae Atriplex hortensis 1 Ah004490
Amaranthaceae Beta vulgaris 2 BVRB_5g099300, BVRB_5g099310
Amaranthaceae Salicornia bigelovii 4 Sbi_jg23998, Sbi_jg23999, Sbi_jg7827, Sbi_jg7828
Amaranthaceae Salicornia europaea 2 Seu_jg12204, Seu_jg12205
Amaranthaceae Suaeda aralocaspica 2 GOSA_00001088, GOSA_00001089
Amaranthaceae Suaeda glauca 4 Sgl52162, Sgl52163, Sgl57432, Sgl57435
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000004097, gene:ENSEOMG00000005494 ...
gene:ENSEOMG00000020410, gene:ENSEOMG00000023393, gene:ENSEOMG00000023493, gene:ENSEOMG00000025575
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5AG0006170, CQ.Regalona.r1.5AG0006180 ...
CQ.Regalona.r1.5BG0006490
Anacardiaceae Pistacia vera 1 pistato.v30134800
Apiaceae Apium graveolens 3 Ag11G05075, Ag6G01681, Ag7G00643
Asteraceae Flaveria trinervia 4 Ftri13G22822, Ftri14G09583, Ftri2G05629, Ftri3G14520
Brassicaceae Arabidopsis thaliana 4 AT1G64320.1, AT1G64330.1, AT5G41780.1, AT5G41790.1
Brassicaceae Eutrema salsugineum 4 Thhalv10023387m.g.v1.0, Thhalv10024082m.g.v1.0 ...
Thhalv10027620m.g.v1.0, Thhalv10028203m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp2g00430.v2.2, Sp2g00440.v2.2, Sp7g00300.v2.2 ...
Sp7g00310.v2.2
Brassicaceae Brassica nigra 5 BniB01g024410.2N, BniB04g022750.2N, BniB04g022760.2N ...
BniB06g059100.2N, BniB06g059110.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq03G0194
Casuarinaceae Casuarina glauca 2 Cgl03G0220, Cgl03G0243
Hydrocharitaceae Thalassia testudinum 1 gene.Thate03g17960
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-2124, nbisL1-mrna-2125
Nitrariaceae Nitraria sibirica 2 evm.TU.LG10.1507, evm.TU.LG10.1508
Plantaginaceae Plantago ovata 5 Pov_00005338, Pov_00028436, Pov_00028437, Pov_00028438 ...
Pov_00028439
Plumbaginaceae Limonium bicolor 5 Lb2G08262, Lb2G08265, Lb2G08266, Lb4G24244, Lb4G24245
Portulacaceae Portulaca oleracea 7 evm.TU.Contig36.2, evm.TU.Contig40.1, evm.TU.LG04.3291 ...
evm.TU.LG04.3292, evm.TU.LG10.419, evm.TU.LG16.309, evm.TU.LG17.413
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_14_RagTag.125, evm.TU.Scaffold_14_RagTag.127 ...
evm.TU.Scaffold_16_RagTag.103
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-18284, nbisL1-mrna-18285
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-2884, nbisL1-mrna-2885, nbisL1-mrna-4387
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-20379, nbisL1-mrna-8607, nbisL1-mrna-8608
Rhizophoraceae Kandelia candel 3 add.evm.TU.utg000007l.170, add.evm.TU.utg000022l.241 ...
evm.TU.utg000007l.320
Rhizophoraceae Kandelia obovata 2 Maker00014226, Maker00018400
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-15983, nbisL1-mrna-23201, nbisL1-mrna-3572
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-10971, nbisL1-mrna-10973, nbisL1-mrna-6742
Salicaceae Populus euphratica 8 populus_peu03658, populus_peu03660, populus_peu34507 ...
populus_peu34508, populus_peu37758, populus_peu37794, populus_peu37946, populus_peu37954
Solanaceae Lycium barbarum 3 gene-LOC132602431, gene-LOC132608775, gene-LOC132634814
Solanaceae Solanum chilense 3 SOLCI002865100, SOLCI004793100, SOLCI005177000
Solanaceae Solanum pennellii 3 gene-LOC107006870, gene-LOC107027410, gene-LOC107028391
Tamaricaceae Reaumuria soongarica 2 STRG.23355_chr05_-, STRG.23356_chr05_-
Tamaricaceae Tamarix chinensis 3 TC01G4256, TC01G4257, TC02G0609
Zosteraceae Zostera marina 1 Zosma01g06340.v3.1
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