HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000023393
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: Intracellular protein transport protein
Maps and Mapping Data
Chromosome Start End Strand ID
2 1429225 1433545 + gene:ENSEOMG00000023393
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.07 66,178.15 Da 38.57 79.22 -0.82
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS51774 Networked (NET) actin-binding (NAB) domain profile. 1 79 16.555714 IPR011684
Coils Coil Coil 279 306 - -
Coils Coil Coil 189 253 - -
Coils Coil Coil 323 343 - -
Coils Coil Coil 129 163 - -
Coils Coil Coil 387 407 - -
Gene Ontology
Molecular Function:
GO:0003779 (actin binding)
KEGG Pathway
KO Term:
K10352 (myosin heavy chain 9/10/11/14)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G41780.1 myosin heavy chain-related. 0
RefSeq XP_021754317.1 myosin-11-like [Chenopodium quinoa] 0
TrEMBL A0A803LWF6 NAB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg23535, jg37040, jg4738, jg4739, jg7681
Aizoaceae Mesembryanthemum crystallinum 1 gene_1777
Amaranthaceae Atriplex hortensis 1 Ah004490
Amaranthaceae Beta vulgaris 2 BVRB_5g099300, BVRB_5g099310
Amaranthaceae Salicornia bigelovii 4 Sbi_jg23998, Sbi_jg23999, Sbi_jg7827, Sbi_jg7828
Amaranthaceae Salicornia europaea 2 Seu_jg12204, Seu_jg12205
Amaranthaceae Suaeda aralocaspica 2 GOSA_00001088, GOSA_00001089
Amaranthaceae Suaeda glauca 4 Sgl52162, Sgl52163, Sgl57432, Sgl57435
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000004097, gene:ENSEOMG00000005494 ...
gene:ENSEOMG00000020410, gene:ENSEOMG00000023393, gene:ENSEOMG00000023493, gene:ENSEOMG00000025575
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5AG0006170, CQ.Regalona.r1.5AG0006180 ...
CQ.Regalona.r1.5BG0006490
Anacardiaceae Pistacia vera 1 pistato.v30134800
Apiaceae Apium graveolens 3 Ag11G05075, Ag6G01681, Ag7G00643
Asteraceae Flaveria trinervia 4 Ftri13G22822, Ftri14G09583, Ftri2G05629, Ftri3G14520
Brassicaceae Arabidopsis thaliana 4 AT1G64320.1, AT1G64330.1, AT5G41780.1, AT5G41790.1
Brassicaceae Eutrema salsugineum 4 Thhalv10023387m.g.v1.0, Thhalv10024082m.g.v1.0 ...
Thhalv10027620m.g.v1.0, Thhalv10028203m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp2g00430.v2.2, Sp2g00440.v2.2, Sp7g00300.v2.2 ...
Sp7g00310.v2.2
Brassicaceae Brassica nigra 5 BniB01g024410.2N, BniB04g022750.2N, BniB04g022760.2N ...
BniB06g059100.2N, BniB06g059110.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq03G0194
Casuarinaceae Casuarina glauca 2 Cgl03G0220, Cgl03G0243
Hydrocharitaceae Thalassia testudinum 1 gene.Thate03g17960
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-2124, nbisL1-mrna-2125
Nitrariaceae Nitraria sibirica 2 evm.TU.LG10.1507, evm.TU.LG10.1508
Plantaginaceae Plantago ovata 5 Pov_00005338, Pov_00028436, Pov_00028437, Pov_00028438 ...
Pov_00028439
Plumbaginaceae Limonium bicolor 5 Lb2G08262, Lb2G08265, Lb2G08266, Lb4G24244, Lb4G24245
Portulacaceae Portulaca oleracea 7 evm.TU.Contig36.2, evm.TU.Contig40.1, evm.TU.LG04.3291 ...
evm.TU.LG04.3292, evm.TU.LG10.419, evm.TU.LG16.309, evm.TU.LG17.413
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_14_RagTag.125, evm.TU.Scaffold_14_RagTag.127 ...
evm.TU.Scaffold_16_RagTag.103
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-18284, nbisL1-mrna-18285
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-2884, nbisL1-mrna-2885, nbisL1-mrna-4387
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-20379, nbisL1-mrna-8607, nbisL1-mrna-8608
Rhizophoraceae Kandelia candel 3 add.evm.TU.utg000007l.170, add.evm.TU.utg000022l.241 ...
evm.TU.utg000007l.320
Rhizophoraceae Kandelia obovata 2 Maker00014226, Maker00018400
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-15983, nbisL1-mrna-23201, nbisL1-mrna-3572
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-10971, nbisL1-mrna-10973, nbisL1-mrna-6742
Salicaceae Populus euphratica 8 populus_peu03658, populus_peu03660, populus_peu34507 ...
populus_peu34508, populus_peu37758, populus_peu37794, populus_peu37946, populus_peu37954
Solanaceae Lycium barbarum 3 gene-LOC132602431, gene-LOC132608775, gene-LOC132634814
Solanaceae Solanum chilense 3 SOLCI002865100, SOLCI004793100, SOLCI005177000
Solanaceae Solanum pennellii 3 gene-LOC107006870, gene-LOC107027410, gene-LOC107028391
Tamaricaceae Reaumuria soongarica 2 STRG.23355_chr05_-, STRG.23356_chr05_-
Tamaricaceae Tamarix chinensis 3 TC01G4256, TC01G4257, TC02G0609
Zosteraceae Zostera marina 1 Zosma01g06340.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.