Basic Information
Locus ID:
gene:ENSEOMG00000023227
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2 | 18176272 | 18182682 | + | gene:ENSEOMG00000023227 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 36,240.68 Da | 50.85 | 77.69 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 141 | 312 | 1.25179E-63 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 45 | 311 | 2.2E-34 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 47 | 313 | 2.94E-54 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 23 | 316 | 2.2E-56 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 314 | 32.678764 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 258 | 275 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021771254.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X5 [Chenopodium quinoa] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MJX1 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology