Basic Information
Locus ID:
gene:ENSEOMG00000022583
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2 | 1746043 | 1749782 | - | gene:ENSEOMG00000022583 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 42,027.82 Da | 53.81 | 78.47 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 325 | 368 | 7.69657E-19 | - |
| Pfam | PF13639 | Ring finger domain | 324 | 368 | 3.3E-14 | IPR001841 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 27 | 94 | 2.0E-13 | IPR025287 |
| SUPERFAMILY | SSF57850 | RING/U-box | 319 | 371 | 1.71E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 296 | 373 | 2.4E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 326 | 367 | 1.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 326 | 368 | 13.064645 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53110.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021757663.1 | putative RING-H2 finger protein ATL21A [Chenopodium quinoa] | 0 |
| P0CH01 | Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LWI7 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology