HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000022272
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
20 38070411 38072718 - gene:ENSEOMG00000022272
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.10 50,909.89 Da 38.50 92.62 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 12 46 1.0E-4 IPR001810
SUPERFAMILY SSF82171 DPP6 N-terminal domain-like 63 370 6.67E-5 -
SUPERFAMILY SSF81383 F-box domain 12 240 1.3E-10 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G16210.1 F-box family protein. 0
RefSeq XP_021734128.1 F-box protein CPR30-like [Chenopodium quinoa] 0
Swiss-Prot Q9LU24 Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1 0
TrEMBL A0A803L8H5 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 3 Ah000544, Ah000545, Ah000548
Amaranthaceae Beta vulgaris 1 BVRB_5g117790
Amaranthaceae Suaeda aralocaspica 1 GOSA_00017365
Amaranthaceae Suaeda glauca 16 Sgl02265, Sgl02998, Sgl03016, Sgl07416, Sgl08131, Sgl33489 ...
Sgl33542, Sgl38889, Sgl54775, Sgl55167, Sgl55168, Sgl55169, Sgl60078, Sgl60417, Sgl71482, Sgl75070
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000005978, gene:ENSEOMG00000020505 ...
gene:ENSEOMG00000022272, gene:ENSEOMG00000023952, gene:ENSEOMG00000031914, gene:ENSEOMG00000044719
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5AG0023440, CQ.Regalona.r1.5BG0024920 ...
CQ.Regalona.r1.5BG0024930
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.