Basic Information
Locus ID:
gene:ENSEOMG00000022149
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
AMSH-like ubiquitin thioesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2 | 58666412 | 58676297 | + | gene:ENSEOMG00000022149 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 47,730.81 Da | 60.64 | 83.85 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 290 | 417 | 5.22817E-86 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 289 | 393 | 3.8E-18 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 288 | 419 | 3.01E-21 | - |
| Gene3D | G3DSA:1.20.58.80 | - | 1 | 65 | 4.6E-10 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 270 | 420 | 2.0E-58 | - |
| SMART | SM00232 | pad1_6 | 289 | 417 | 6.8E-17 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 290 | 418 | 30.70974 | IPR037518 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48790.1 | associated molecule with the SH3 domain of STAM 1. | 0 |
| RefSeq | XP_021727742.1 | AMSH-like ubiquitin thioesterase 1 [Chenopodium quinoa] | 0 |
| Q8VYB5 | AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=AMSH1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RBA7 | MPN domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_086080 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology