Basic Information
Locus ID:
gene:ENSEOMG00000021956
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2 | 1387989 | 1394051 | - | gene:ENSEOMG00000021956 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 71,940.23 Da | 39.37 | 80.33 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 417 | 455 | 0.013 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 508 | 539 | 0.011 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 145 | 2.86E-11 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 329 | 644 | 5.22E-51 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 18 | 150 | 2.5E-16 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 305 | 647 | 1.3E-125 | IPR015943 |
| SMART | SM00320 | WD40_4 | 373 | 412 | 0.036 | IPR001680 |
| SMART | SM00320 | WD40_4 | 501 | 539 | 6.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 606 | 645 | 31.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 458 | 497 | 0.023 | IPR001680 |
| SMART | SM00320 | WD40_4 | 323 | 362 | 0.031 | IPR001680 |
| SMART | SM00320 | WD40_4 | 550 | 589 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 415 | 455 | 7.9E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 508 | 548 | 13.215325 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 142 | 8.471226 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 508 | 541 | 10.653776 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 422 | 464 | 10.307941 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 379 | 421 | 9.271977 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 526 | 540 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 399 | 413 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 399 | 413 | 1.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 442 | 456 | 1.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 526 | 540 | 1.5E-6 | IPR020472 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_021757615.1 | protein SPA1-RELATED 2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LWF1 | Protein SPA1-RELATED 2-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology