Basic Information
Locus ID:
gene:ENSEOMG00000021246
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2 | 66568061 | 66572193 | + | gene:ENSEOMG00000021246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 62,070.15 Da | 39.91 | 90.54 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 97 | 256 | 7.2E-21 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 437 | 503 | 1.2E-9 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 93 | 265 | 1.31E-27 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 96 | 267 | 4.4E-37 | IPR036465 |
| SMART | SM00327 | VWA_4 | 95 | 261 | 2.1E-18 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 97 | 273 | 17.420338 | IPR002035 |
| Coils | Coil | Coil | 409 | 432 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54780.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_010675828.1 | E3 ubiquitin-protein ligase WAV3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LTA6 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LXY2 | VWFA domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology