Basic Information
Locus ID:
gene:ENSEOMG00000021142
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 19 | 3876406 | 3878894 | + | gene:ENSEOMG00000021142 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 51,591.49 Da | 42.16 | 74.96 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 171 | 447 | 7.45986E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 412 | 447 | 6.4E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 322 | 362 | 0.0012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 282 | 317 | 2.9E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 148 | 448 | 1.1E-62 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 107 | 449 | 3.0E-122 | IPR015943 |
| SMART | SM00320 | WD40_4 | 237 | 274 | 0.06 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 362 | 1.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 365 | 405 | 97.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 408 | 447 | 9.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 193 | 234 | 0.028 | IPR001680 |
| SMART | SM00320 | WD40_4 | 150 | 191 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 317 | 1.5E-7 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 415 | 448 | 11.761044 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 415 | 448 | 14.217871 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 285 | 326 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 285 | 317 | 10.864685 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 327 | 371 | 9.305395 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 202 | 243 | 8.67045 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 349 | 363 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 434 | 448 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 35 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_021769011.1 | protein FIZZY-RELATED 3-like [Chenopodium quinoa] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S028 | WD_REPEATS_REGION domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_009880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology