HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000021140
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: F-Box protein
Maps and Mapping Data
Chromosome Start End Strand ID
2 81497230 81498480 - gene:ENSEOMG00000021140
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.49 48,038.12 Da 38.17 91.56 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 4 44 2.8E-5 IPR001810
Pfam PF03478 Protein of unknown function (DUF295) 311 361 4.0E-9 IPR005174
SUPERFAMILY SSF81383 F-box domain 3 87 8.5E-6 IPR036047
SMART SM00256 fbox_2 7 48 1.5E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021733586.1 uncharacterized protein LOC110700368 [Chenopodium quinoa] 0
TrEMBL A0A803L8J5 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg34713
Aizoaceae Mesembryanthemum crystallinum 9 gene_19582, gene_19584, gene_19585, gene_19586, gene_19587 ...
gene_19588, gene_19589, gene_19590, gene_19591
Amaranthaceae Atriplex hortensis 8 Ah000578, Ah000579, Ah003817, Ah027104, Ah027105, Ah027106 ...
Ah034586, Ah039224
Amaranthaceae Beta vulgaris 1 BVRB_3g063530
Amaranthaceae Suaeda glauca 2 Sgl56149, Sgl60852
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000019527, gene:ENSEOMG00000021140 ...
gene:ENSEOMG00000040513
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.1BG0002490, CQ.Regalona.r1.6AG0002800
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.