Basic Information
Locus ID:
gene:ENSEOMG00000020651
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 19 | 630494 | 631357 | + | gene:ENSEOMG00000020651 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 33,193.62 Da | 58.11 | 93.97 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 235 | 278 | 2.8E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 224 | 282 | 6.82E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 282 | 1.2E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 236 | 277 | 4.5E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 236 | 278 | 12.69582 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010667193.1 | uncharacterized protein LOC104884266 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0J8B1Y8 | RING-type domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_012910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17899 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034786 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030790 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020651 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0021620, CQ.Regalona.r1.2AG0023350 |