HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000020505
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
2 81746269 81748106 - gene:ENSEOMG00000020505
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.31 50,337.96 Da 35.65 79.20 -0.48
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 7 74 6.21E-7 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 112 196 7.5E-12 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G47790.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021734128.1 F-box protein CPR30-like [Chenopodium quinoa] 0
Swiss-Prot Q9FZF8 Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE=4 SV=1 0
TrEMBL A0A803L8H5 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 3 Ah000544, Ah000545, Ah000548
Amaranthaceae Beta vulgaris 1 BVRB_5g117790
Amaranthaceae Suaeda aralocaspica 1 GOSA_00017365
Amaranthaceae Suaeda glauca 16 Sgl02265, Sgl02998, Sgl03016, Sgl07416, Sgl08131, Sgl33489 ...
Sgl33542, Sgl38889, Sgl54775, Sgl55167, Sgl55168, Sgl55169, Sgl60078, Sgl60417, Sgl71482, Sgl75070
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000005978, gene:ENSEOMG00000020505 ...
gene:ENSEOMG00000022272, gene:ENSEOMG00000023952, gene:ENSEOMG00000031914, gene:ENSEOMG00000044719
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5AG0023440, CQ.Regalona.r1.5BG0024920 ...
CQ.Regalona.r1.5BG0024930
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.