Basic Information
Locus ID:
gene:ENSEOMG00000020388
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 19 | 36823713 | 36826448 | - | gene:ENSEOMG00000020388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 63,524.89 Da | 35.92 | 91.00 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 183 | 449 | 1.6E-89 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 1 | 86 | 2.2E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 1 | 87 | 7.69E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 133 | 2.5E-10 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 183 | 473 | 90.204483 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1 | 70 | 11.647012 | IPR000210 |
| Coils | Coil | Coil | 509 | 536 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021770684.1 | BTB/POZ domain-containing protein At5g03250-like [Chenopodium quinoa] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology