HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000020147
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: B3 domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
18 2326530 2328526 + gene:ENSEOMG00000020147
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.50 48,624.12 Da 34.05 84.99 -0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF117281 Kelch motif 141 375 4.84E-5 IPR015915
SUPERFAMILY SSF81383 F-box domain 42 119 2.49E-9 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 148 360 3.1E-14 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G23880.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021736588.1 putative F-box/kelch-repeat protein At1g12870 [Chenopodium quinoa] 0
Swiss-Prot Q9LIR8 F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1 0
TrEMBL A0A803LMX2 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah006920, Ah010347, Ah010827, Ah037108
Amaranthaceae Salicornia bigelovii 1 Sbi_jg46576
Amaranthaceae Suaeda glauca 3 Sgl70951, Sgl74470, Sgl74565
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000019836, gene:ENSEOMG00000020147
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0025030, CQ.Regalona.r1.4BG0008370 ...
CQ.Regalona.r1.7BG0009430, CQ.Regalona.r1.7BG0009440
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.