HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000019836
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
19 6009190 6010627 + gene:ENSEOMG00000019836
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.51 19,907.17 Da 46.92 75.56 -0.39
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 24 56 2.5E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 17 157 2.22E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 106 1.3E-5 -
SMART SM00256 fbox_2 18 59 4.6E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G23880.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021738806.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
Swiss-Prot Q9LIR8 F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1 0
TrEMBL A0A7C9F1X6 F-box domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah006920, Ah010347, Ah010827, Ah037108
Amaranthaceae Salicornia bigelovii 1 Sbi_jg46576
Amaranthaceae Suaeda glauca 3 Sgl70951, Sgl74470, Sgl74565
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000019836, gene:ENSEOMG00000020147
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0025030, CQ.Regalona.r1.4BG0008370 ...
CQ.Regalona.r1.7BG0009430, CQ.Regalona.r1.7BG0009440
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.