halophFGD

Basic Information

Locus ID: gene:ENSEOMG00000019579

Species & Taxonomic ID: Chenopodium album & 3559

Genome Assembly: GCA_948465745.1

Short Name: IAA19

Description: Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
17	41322868	41324187	+	gene:ENSEOMG00000019579

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.28	17,991.53 Da	64.87	87.06	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02309	AUX/IAA family	59	141	2.7E-20	IPR033389
Gene3D	G3DSA:3.10.20.90	-	97	150	1.2E-9	-

KEGG Pathway

KO Term:

K14484 (auxin-responsive protein IAA)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G52830.1	indole-3-acetic acid 6. An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid.
RefSeq	XP_021732096.1	auxin-induced protein IAA6-like [Chenopodium quinoa]
Swiss-Prot	P49680	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1
TrEMBL	A0A803LEK1	Auxin-responsive protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg11125, jg12643, jg16163, jg25380, jg27188, jg27189, jg8735 ... jg27828, jg37840
Aizoaceae	Mesembryanthemum crystallinum	4	gene_11693, gene_11694, gene_19350, gene_26163
Amaranthaceae	Atriplex hortensis	6	Ah000273, Ah006132, Ah006133, Ah006134, Ah010684, Ah010685
Amaranthaceae	Beta vulgaris	4	BVRB_4g082270, BVRB_5g104590, BVRB_5g120300, BVRB_9g220390
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg11485, Sbi_jg16803, Sbi_jg16806, Sbi_jg31556 ... Sbi_jg46415, Sbi_jg57727, Sbi_jg61322, Sbi_jg61324
Amaranthaceae	Salicornia europaea	4	Seu_jg20736, Seu_jg23054, Seu_jg23055, Seu_jg25375
Amaranthaceae	Suaeda aralocaspica	9	GOSA_00005253, GOSA_00008206, GOSA_00008207, GOSA_00008208 ... GOSA_00008209, GOSA_00019481, GOSA_00024682, GOSA_00025843, GOSA_00029228
Amaranthaceae	Suaeda glauca	9	Sgl24838, Sgl24839, Sgl29984, Sgl29985, Sgl54306, Sgl55869 ... Sgl55997, Sgl59650, Sgl61178
Amaranthaceae	Chenopodium album	15	gene:ENSEOMG00000006929, gene:ENSEOMG00000009766 ... gene:ENSEOMG00000010841, gene:ENSEOMG00000011203, gene:ENSEOMG00000019579, gene:ENSEOMG00000020345, gene:ENSEOMG00000026475, gene:ENSEOMG00000028992, gene:ENSEOMG00000029568, gene:ENSEOMG00000029994, gene:ENSEOMG00000038759, gene:ENSEOMG00000041166, gene:ENSEOMG00000042597, gene:ENSEOMG00000042845, gene:ENSEOMG00000052906
Amaranthaceae	Chenopodium quinoa	10	CQ.Regalona.r1.4AG0010590, CQ.Regalona.r1.4AG0010600 ... CQ.Regalona.r1.4AG0010610, CQ.Regalona.r1.4BG0010810, CQ.Regalona.r1.4BG0010820, CQ.Regalona.r1.4BG0010830, CQ.Regalona.r1.5AG0025610, CQ.Regalona.r1.5BG0027130, CQ.Regalona.r1.7BG0010690, CQ.Regalona.r1.9AG0013920
Anacardiaceae	Pistacia vera	6	pistato.v30026350, pistato.v30126970, pistato.v30126980 ... pistato.v30184400, pistato.v30235720, pistato.v30255980
Apiaceae	Apium graveolens	10	Ag10G00703, Ag1G01813, Ag2G02344, Ag4G00136, Ag4G00137 ... Ag5G02561, Ag8G01540, Ag9G01154, Ag9G01736, Ag9G02083
Arecaceae	Cocos nucifera	4	COCNU_02G000230, COCNU_03G001800, COCNU_06G015050 ... COCNU_14G011800
Arecaceae	Phoenix dactylifera	5	gene-LOC103704407, gene-LOC103704533, gene-LOC103705981 ... gene-LOC103720508, gene-LOC103721010
Asparagaceae	Asparagus officinalis	7	AsparagusV1_03.3028.V1.1, AsparagusV1_03.582.V1.1 ... AsparagusV1_06.1943.V1.1, AsparagusV1_07.2576.V1.1, AsparagusV1_07.3197.V1.1, AsparagusV1_08.2042.V1.1, AsparagusV1_08.642.V1.1
Asteraceae	Flaveria trinervia	12	Ftri10G02327, Ftri12G12220, Ftri15G05652, Ftri18G06468 ... Ftri18G08799, Ftri18G22483, Ftri1G01589, Ftri1G24079, Ftri8G09746, Ftri8G31056, Ftri9G13988, Ftri9G15987
Brassicaceae	Arabidopsis thaliana	8	AT1G04240.1, AT1G15580.1, AT1G52830.1, AT1G80390.1 ... AT3G15540.1, AT3G23030.1, AT4G14560.1, AT5G43700.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10003276m.g.v1.0, Thhalv10008636m.g.v1.0 ... Thhalv10012354m.g.v1.0, Thhalv10019723m.g.v1.0, Thhalv10021556m.g.v1.0, Thhalv10021641m.g.v1.0, Thhalv10026385m.g.v1.0
Brassicaceae	Schrenkiella parvula	8	Sp1g03050.v2.2, Sp1g13950.v2.2, Sp1g39420.v2.2 ... Sp2g08490.v2.2, Sp3g13810.v2.2, Sp3g20710.v2.2, Sp5g35420.v2.2, Sp7g12650.v2.2
Brassicaceae	Brassica nigra	14	BniB01g039230.2N, BniB01g049370.2N, BniB02g001600.2N ... BniB03g024980.2N, BniB03g026360.2N, BniB04g012970.2N, BniB04g017520.2N, BniB04g056820.2N, BniB06g046640.2N, BniB06g068540.2N, BniB07g020240.2N, BniB07g028320.2N, BniB07g048870.2N, BniB07g054140.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G0235, Ceq06G1392, Ceq07G0380, Ceq07G1240, Ceq08G2221
Casuarinaceae	Casuarina glauca	3	Cgl02G0256, Cgl07G0392, Cgl08G2374
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g01300, gene.Cymno06g12840, gene.Cymno12g00360
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate02g32970, gene.Thate02g40880, gene.Thate03g20010 ... gene.Thate07g14490, gene.Thate08g10950
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-12086, nbisL1-mrna-5001, nbisL1-mrna-6330
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG01.392, evm.TU.LG01.393, evm.TU.LG03.2257 ... evm.TU.LG04.1188, evm.TU.LG07.1028, evm.TU.LG11.908
Plantaginaceae	Plantago ovata	4	Pov_00007916, Pov_00015441, Pov_00015443, Pov_00024673
Plumbaginaceae	Limonium bicolor	7	Lb0G37175, Lb1G06945, Lb1G07954, Lb2G10316, Lb4G22668 ... Lb4G23912, Lb5G28968
Poaceae	Echinochloa crus-galli	20	AH01.1212, AH01.223, AH02.437, AH03.418, AH05.1143, BH01.524 ... AH05.3970, AH06.2185, AH06.2187, BH02.454, BH03.509, BH05.1348, BH05.4064, CH01.1437, CH01.380, CH02.501, CH03.598, CH04.2219, CH05.4271, CH06.2216
Poaceae	Eleusine coracana subsp. coracana	16	gene-QOZ80_1AG0011990, gene-QOZ80_1BG0060570 ... gene-QOZ80_3AG0212410, gene-QOZ80_3AG0225040, gene-QOZ80_3BG0257620, gene-QOZ80_3BG0270300, gene-QOZ80_5AG0396900, gene-QOZ80_5AG0402820, gene-QOZ80_5AG0402840, gene-QOZ80_5BG0445390, gene-QOZ80_5BG0451310, gene-QOZ80_6AG0544070, gene-QOZ80_6BG0497520, gene-QOZ80_7AG0558390, gene-QOZ80_7BG0589570, gene-QOZ80_UnG0727940
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.1HG0027200.1, HORVU.MOREX.r3.1HG0082640.1 ... HORVU.MOREX.r3.3HG0239900.1, HORVU.MOREX.r3.5HG0433440.1, HORVU.MOREX.r3.5HG0509090.1, HORVU.MOREX.r3.5HG0519690.1, HORVU.MOREX.r3.7HG0714400.1
Poaceae	Lolium multiflorum	9	gene-QYE76_000678, gene-QYE76_000681, gene-QYE76_009739 ... gene-QYE76_010026, gene-QYE76_032536, gene-QYE76_034879, gene-QYE76_042860, gene-QYE76_061216, gene-QYE76_062928
Poaceae	Oryza coarctata	14	Oco01G003280, Oco05G018550, Oco05G026110, Oco06G019320 ... Oco06G027010, Oco09G003530, Oco09G005130, Oco10G003520, Oco11G012110, Oco12G012270, Oco13G002630, Oco14G002930, Oco23G009910, Oco24G009590
Poaceae	Oryza sativa	7	LOC_Os01g08320.1, LOC_Os03g43410.1, LOC_Os03g58350.1 ... LOC_Os05g08570.1, LOC_Os06g39590.1, LOC_Os07g08460.1, LOC_Os12g40900.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G050000, gene-BS78_01G148600 ... gene-BS78_02G057300, gene-BS78_03G042000, gene-BS78_08G135900, gene-BS78_09G070300, gene-BS78_10G180800
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0104449, Pt_Chr0105410, Pt_Chr0105493, Pt_Chr0200290 ... Pt_Chr0303715, Pt_Chr0303718, Pt_Chr0400609, Pt_Chr0501631, Pt_Chr0501644, Pt_Chr0502774, Pt_Chr0704301
Poaceae	Sporobolus alterniflorus	19	Chr01G002730, Chr01G009800, Chr01G011540, Chr02G020110 ... Chr02G029600, Chr03G005580, Chr04G018590, Chr05G007250, Chr05G011010, Chr06G019370, Chr07G029520, Chr08G006030, Chr12G027200, Chr12G034600, Chr18G000020, Chr19G008030, Chr22G014010, Chr27G008630, Chr28G002060
Poaceae	Thinopyrum elongatum	6	Tel1E01G218900, Tel3E01G209200, Tel5E01G125700 ... Tel5E01G602100, Tel5E01G691800, Tel7E01G603900
Poaceae	Triticum dicoccoides	13	gene_TRIDC1AG013630, gene_TRIDC1BG020760 ... gene_TRIDC3AG015130, gene_TRIDC3BG019700, gene_TRIDC5AG008910, gene_TRIDC5AG055310, gene_TRIDC5AG063450, gene_TRIDC5BG009690, gene_TRIDC5BG059330, gene_TRIDC5BG059350, gene_TRIDC5BG067960, gene_TRIDC7AG051940, gene_TRIDC7BG041950
Poaceae	Triticum aestivum	17	TraesCS1A02G118400.2, TraesCS1B02G138100.1 ... TraesCS1D02G119500.1, TraesCS3A02G121300.2, TraesCS3B02G140700.1, TraesCS3D02G123400.1, TraesCS5A02G058700.1, TraesCS5A02G378200.1, TraesCS5B02G058800.1, TraesCS5B02G381800.1, TraesCS5B02G446100.1, TraesCS5D02G069200.1, TraesCS5D02G388200.1, TraesCS5D02G449400.1, TraesCS7A02G371500.1, TraesCS7B02G256100.1, TraesCS7D02G351400.1
Poaceae	Zea mays	8	Zm00001eb031190_P003, Zm00001eb051060_P001 ... Zm00001eb060950_P002, Zm00001eb122410_P001, Zm00001eb135570_P001, Zm00001eb212890_P001, Zm00001eb218860_P001, Zm00001eb301590_P001
Poaceae	Zoysia japonica	13	nbis-gene-10124, nbis-gene-13199, nbis-gene-15358 ... nbis-gene-16473, nbis-gene-20405, nbis-gene-23573, nbis-gene-26796, nbis-gene-35645, nbis-gene-39667, nbis-gene-41100, nbis-gene-44585, nbis-gene-47575, nbis-gene-6800
Poaceae	Zoysia macrostachya	13	Zma_g10066, Zma_g25293, Zma_g2576, Zma_g26086, Zma_g26532 ... Zma_g282, Zma_g30764, Zma_g3229, Zma_g33011, Zma_g4824, Zma_g6101, Zma_g7724, Zma_g908
Portulacaceae	Portulaca oleracea	10	evm.TU.LG01.2867, evm.TU.LG02.1144, evm.TU.LG06.1191 ... evm.TU.LG06.1192, evm.TU.LG07.1721, evm.TU.LG08.523, evm.TU.LG09.829, evm.TU.LG11.549, evm.TU.LG22.1550, evm.TU.LG22.1551
Posidoniaceae	Posidonia oceanica	4	gene.Posoc03g02700, gene.Posoc03g24490, gene.Posoc08g15440 ... gene.Posoc09g11700
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_10_RagTag.1245, evm.TU.Scaffold_1_RagTag.279 ... evm.TU.Scaffold_3_RagTag.373, evm.TU.Scaffold_5_RagTag.1056, evm.TU.Scaffold_6_RagTag.816
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-11297, nbisL1-mrna-1552, nbisL1-mrna-15870 ... nbisL1-mrna-27844, nbisL1-mrna-3361, nbisL1-mrna-6894, nbisL1-mrna-6957, nbisL1-mrna-7920
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10681, nbisL1-mrna-17103, nbisL1-mrna-17360 ... nbisL1-mrna-19000, nbisL1-mrna-7609
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-10333, nbisL1-mrna-16998, nbisL1-mrna-5338 ... nbisL1-mrna-6112, nbisL1-mrna-692
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000004l.374, evm.TU.utg000006l.350 ... evm.TU.utg000011l.504, evm.TU.utg000012l.189, evm.TU.utg000019l.1002
Rhizophoraceae	Kandelia obovata	5	Maker00004129, Maker00007359, Maker00011048, Maker00012608 ... Maker00012959
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-15256, nbisL1-mrna-16376, nbisL1-mrna-6403 ... nbisL1-mrna-7771, nbisL1-mrna-9937
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-18031, nbisL1-mrna-19763, nbisL1-mrna-21242 ... nbisL1-mrna-2189, nbisL1-mrna-254, nbisL1-mrna-4223
Salicaceae	Populus euphratica	9	populus_peu02796, populus_peu07467, populus_peu13585 ... populus_peu15126, populus_peu15927, populus_peu21479, populus_peu32788, populus_peu33716, populus_peu37058
Solanaceae	Lycium barbarum	8	gene-LOC132598510, gene-LOC132602370, gene-LOC132604923 ... gene-LOC132607953, gene-LOC132610499, gene-LOC132618705, gene-LOC132633356, gene-LOC132642611
Solanaceae	Solanum chilense	7	SOLCI000980000, SOLCI001138400, SOLCI002281300 ... SOLCI002322300, SOLCI002322400, SOLCI005451800, SOLCI007522000
Solanaceae	Solanum pennellii	9	gene-LOC107012943, gene-LOC107015399, gene-LOC107015632 ... gene-LOC107021028, gene-LOC107021292, gene-LOC107022060, gene-LOC107022782, gene-LOC107029221, gene-LOC107031598
Tamaricaceae	Reaumuria soongarica	6	STRG.14871_chr08_+, STRG.17640_chr09_+, STRG.28468_chr04_+ ... gene_10913, gene_4887, gene_4889
Tamaricaceae	Tamarix chinensis	5	TC02G3468, TC05G1187, TC07G2313, TC08G2098, TC08G2099
Zosteraceae	Zostera marina	5	Zosma01g05970.v3.1, Zosma01g08410.v3.1, Zosma05g32570.v3.1 ... Zosma06g12240.v3.1, Zosma06g24030.v3.1