Basic Information
Locus ID:
gene:ENSEOMG00000019556
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 18 | 10697751 | 10706722 | - | gene:ENSEOMG00000019556 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 64,326.51 Da | 28.61 | 96.68 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 33 | 77 | 9.88377E-6 | IPR018392 |
| CDD | cd14066 | STKc_IRAK | 300 | 560 | 8.59134E-89 | - |
| Pfam | PF01476 | LysM domain | 95 | 131 | 0.0029 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 296 | 560 | 8.2E-47 | IPR001245 |
| Pfam | PF01476 | LysM domain | 34 | 78 | 3.5E-5 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 274 | 562 | 2.29E-77 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 3.92E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 365 | 578 | 2.3E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 364 | 1.5E-27 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 27 | 84 | 4.7E-10 | IPR036779 |
| SMART | SM00220 | serkin_6 | 294 | 564 | 3.9E-41 | IPR000719 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 3.2E-6 | IPR018392 |
| SMART | SM00257 | LysM_2 | 159 | 208 | 4.9 | IPR018392 |
| SMART | SM00257 | LysM_2 | 94 | 140 | 4.9 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 158 | 207 | 8.522449 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 582 | 38.435307 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 10.863122 | IPR018392 |
| ProSitePatterns | PS00430 | TonB-dependent receptor proteins signature 1. | 1 | 47 | - | IPR010916 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 409 | 421 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 300 | 322 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021738959.1 | chitin elicitor receptor kinase 1-like isoform X1 [Chenopodium quinoa] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology