Basic Information
Locus ID:
gene:ENSEOMG00000019465
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 19 | 26923060 | 26927766 | + | gene:ENSEOMG00000019465 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 70,387.77 Da | 31.09 | 95.99 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 455 | 586 | 4.88466E-48 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 468 | 578 | 7.7E-25 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 267 | 430 | 1.2E-31 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 311 | 599 | 9.64E-67 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 451 | 615 | 3.3E-48 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 236 | 450 | 8.6E-55 | IPR027417 |
| SMART | SM00490 | helicmild6 | 497 | 578 | 1.2E-25 | IPR001650 |
| SMART | SM00487 | ultradead3 | 261 | 458 | 1.0E-45 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 454 | 618 | 22.912613 | IPR001650 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 242 | 270 | 10.121229 | IPR014014 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 273 | 443 | 23.932682 | IPR014001 |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.3 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_021763732.1 | eukaryotic initiation factor 4A-9 [Chenopodium quinoa] | 0 |
| Q6Z2Z4 | Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0146600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N1Y7 | Eukaryotic initiation factor 4A-11 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology