Basic Information
Locus ID:
gene:ENSEOMG00000019039
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 18 | 4007030 | 4009905 | + | gene:ENSEOMG00000019039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.78 | 58,815.65 Da | 45.20 | 74.69 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 238 | 514 | 9.24033E-41 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 349 | 384 | 3.4E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 389 | 429 | 7.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 479 | 514 | 7.6E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 215 | 515 | 9.06E-63 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 174 | 516 | 4.6E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 345 | 384 | 1.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 432 | 472 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 217 | 258 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 261 | 301 | 0.029 | IPR001680 |
| SMART | SM00320 | WD40_4 | 387 | 429 | 1.6E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 475 | 514 | 9.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 304 | 341 | 0.06 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 269 | 310 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 352 | 393 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 394 | 438 | 8.837541 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 482 | 515 | 11.761044 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 482 | 515 | 14.217871 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 352 | 384 | 10.864685 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 501 | 515 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 416 | 430 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 66 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_021769011.1 | protein FIZZY-RELATED 3-like [Chenopodium quinoa] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S028 | WD_REPEATS_REGION domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_009880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology