Basic Information
Locus ID:
gene:ENSEOMG00000018542
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 18 | 28680272 | 28690352 | + | gene:ENSEOMG00000018542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 118,618.92 Da | 43.98 | 71.85 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 179 | 274 | 1.3029E-44 | - |
| CDD | cd13999 | STKc_MAP3K-like | 805 | 1062 | 1.51223E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 801 | 1061 | 5.5E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 192 | 274 | 1.7E-18 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 191 | 280 | 2.22E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 787 | 1059 | 3.78E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 887 | 1073 | 2.5E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 196 | 277 | 1.7E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 792 | 886 | 1.0E-25 | - |
| SMART | SM00220 | serkin_6 | 799 | 1066 | 5.4E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 190 | 277 | 3.1E-32 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 175 | 277 | 11.203239 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 799 | 1080 | 41.134899 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 805 | 830 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 924 | 936 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 989 | 1011 | 4.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 918 | 936 | 4.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 881 | 894 | 4.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1033 | 1055 | 4.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 364 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021730558.1 | uncharacterized protein LOC110697503 [Chenopodium quinoa] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N065 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology