Basic Information
Locus ID:
gene:ENSEOMG00000017789
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
DA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 19 | 3470764 | 3476876 | - | gene:ENSEOMG00000017789 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 58,872.07 Da | 51.55 | 62.07 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09396 | LIM_DA1 | 158 | 210 | 5.39184E-25 | - |
| Pfam | PF12315 | Protein DA1 | 307 | 516 | 1.4E-99 | IPR022087 |
| Pfam | PF00412 | LIM domain | 158 | 211 | 5.2E-8 | IPR001781 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 151 | 183 | 3.43E-5 | - |
| Gene3D | G3DSA:2.10.110.10 | Cysteine Rich Protein | 153 | 217 | 2.7E-11 | - |
| SMART | SM00132 | lim_4 | 157 | 209 | 2.8E-8 | IPR001781 |
| ProSiteProfiles | PS50023 | LIM domain profile. | 156 | 216 | 10.6921 | IPR001781 |
| ProSitePatterns | PS00478 | LIM zinc-binding domain signature. | 158 | 192 | - | IPR001781 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 465 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39830.1 | DA1-related protein 2. | 0 |
| RefSeq | XP_021732361.1 | protein DA1-related 2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q0WSN2 | Protein DA1-related 2 OS=Arabidopsis thaliana OX=3702 GN=DAR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDF4 | LIM zinc-binding domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_085280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology