Basic Information
Locus ID:
gene:ENSEOMG00000017279
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Phosphatidylinositol phosphatidylcholine transfer protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 17 | 7818625 | 7819520 | + | gene:ENSEOMG00000017279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 14,714.97 Da | 45.63 | 104.92 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF46938 | CRAL/TRIO N-terminal domain | 18 | 51 | 3.01E-5 | IPR036273 |
| Gene3D | G3DSA:3.40.525.10 | - | 3 | 124 | 5.1E-6 | IPR036865 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55840.1 | Sec14p-like phosphatidylinositol transfer family protein. | 0 |
| RefSeq | XP_021745088.1 | phosphatidylinositol/phosphatidylcholine transfer protein SFH2-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LQB6 | CRAL-TRIO domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah025137 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000017279 |
| Apiaceae | Apium graveolens | 2 | Ag5G02704, Ag8G01154 |
| Brassicaceae | Brassica nigra | 1 | BniB02g032340.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G006520 |
| Poaceae | Zea mays | 9 | Zm00001eb177610_P001, Zm00001eb186210_P001 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.214 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19746 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003664 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17967 |