Basic Information
Locus ID:
gene:ENSEOMG00000015873
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Replication factor A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 33990963 | 33991457 | - | gene:ENSEOMG00000015873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 13,099.68 Da | 42.70 | 73.45 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04476 | RPA1_DBD_C | 16 | 113 | 1.44141E-19 | IPR013955 |
| Pfam | PF08646 | Replication factor-A C terminal domain | 27 | 112 | 2.4E-10 | IPR013955 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 4 | 112 | 8.57E-20 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 1 | 113 | 1.5E-25 | - |
KEGG Pathway
KO Term:
Pathway:
ko03030 (DNA replication)
map03030 (DNA replication)
ko03420 (Nucleotide excision repair)
map03420 (Nucleotide excision repair)
ko03430 (Mismatch repair)
map03430 (Mismatch repair)
ko03440 (Homologous recombination)
map03440 (Homologous recombination)
ko03460 (Fanconi anemia pathway)
map03460 (Fanconi anemia pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021863548.1 | uncharacterized protein LOC110802415 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RA04 | Secreted protein OS=Spinacia oleracea OX=3562 GN=SOVF_089910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology