halophFGD

Basic Information

Locus ID: gene:ENSEOMG00000015744

Species & Taxonomic ID: Chenopodium album & 3559

Genome Assembly: GCA_948465745.1

Description: F-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
15	48309691	48311952	+	gene:ENSEOMG00000015744

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.06	45,623.34 Da	35.65	94.06	0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	29	72	1.6E-4	IPR001810
SUPERFAMILY	SSF81383	F-box domain	30	91	9.29E-10	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	25	82	5.1E-6	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G12560.1	F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.	0
RefSeq	XP_021740885.1	F-box protein CPR30-like [Chenopodium quinoa]	0
Swiss-Prot	Q9SU30	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	0
TrEMBL	A0A803MAH3	F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	9	Ah018602, Ah018642, Ah019997, Ah021970, Ah021971, Ah022635 ... Ah022636, Ah022637, Ah035999
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg56203, Sbi_jg56204
Amaranthaceae	Salicornia europaea	1	Seu_jg26671
Amaranthaceae	Suaeda aralocaspica	11	GOSA_00014153, GOSA_00014155, GOSA_00014156, GOSA_00014159 ... GOSA_00014160, GOSA_00014161, GOSA_00014162, GOSA_00014163, GOSA_00014164, GOSA_00015872, GOSA_00029277
Amaranthaceae	Suaeda glauca	18	Sgl12082, Sgl12087, Sgl12088, Sgl12091, Sgl12194, Sgl12277 ... Sgl12284, Sgl12289, Sgl14574, Sgl17376, Sgl17381, Sgl17383, Sgl17384, Sgl17507, Sgl17514, Sgl17566, Sgl19735, Sgl19745
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000015744, gene:ENSEOMG00000043764
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.3AG0015240, CQ.Regalona.r1.3BG0014600