Basic Information
Locus ID:
gene:ENSEOMG00000015230
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 17 | 34118156 | 34120574 | - | gene:ENSEOMG00000015230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 29,988.47 Da | 59.69 | 71.61 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 206 | 252 | 5.4E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 191 | 253 | 7.51E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 192 | 259 | 6.4E-11 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 208 | 247 | 10.010774 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 131 | - | - |
| Coils | Coil | Coil | 136 | 163 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_021729856.1 | uncharacterized protein LOC110696831 [Chenopodium quinoa] | 0 |
| Q0MW30 | E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus OX=10090 GN=Neurl1b PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S214 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_008300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology