Basic Information
Locus ID:
gene:ENSEOMG00000015107
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 43889673 | 43892563 | + | gene:ENSEOMG00000015107 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 66,089.04 Da | 32.08 | 69.30 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 18 | 148 | 4.85651E-45 | IPR033734 |
| CDD | cd09612 | Jacalin | 258 | 387 | 1.22133E-37 | IPR033734 |
| CDD | cd09612 | Jacalin | 457 | 585 | 4.25097E-37 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 18 | 149 | 3.7E-33 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 454 | 585 | 1.4E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 258 | 387 | 5.3E-28 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 8 | 149 | 1.57E-42 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 247 | 386 | 6.41E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 443 | 584 | 1.03E-42 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 434 | 585 | 1.3E-54 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 239 | 387 | 4.2E-46 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 1 | 147 | 3.4E-54 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 454 | 586 | 2.3E-45 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 18 | 149 | 6.8E-41 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 258 | 388 | 4.4E-33 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 7 | 149 | 49.276257 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 443 | 586 | 51.874294 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 247 | 388 | 45.505817 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 231 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021759624.1 | uncharacterized protein LOC110724509 [Chenopodium quinoa] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LKG9 | DYW_deaminase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology