HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000014968
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: E3 ubiquitin-protein ligase
Maps and Mapping Data
Chromosome Start End Strand ID
16 3002744 3005326 - gene:ENSEOMG00000014968
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.00 49,178.34 Da 32.00 81.29 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF18346 Mind bomb SH3 repeat domain 133 254 9.5E-19 IPR040847
Pfam PF18346 Mind bomb SH3 repeat domain 260 381 1.0E-20 IPR040847
Pfam PF18346 Mind bomb SH3 repeat domain 63 125 1.9E-8 IPR040847
KEGG Pathway
KO Term:
K16279 (E3 ubiquitin-protein ligase KEG [EC:2.7.11.1 2.3.2.27])
Best hit
Source Best Hit ID Description E-value
TAIR AT5G13530.2 protein kinases;ubiquitin-protein ligases. Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. 0
RefSeq XP_021774488.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG-like [Chenopodium quinoa] 0
Swiss-Prot Q9FY48 E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana OX=3702 GN=KEG PE=1 SV=2 0
TrEMBL A0A803MMY3 RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg26620, jg29897
Aizoaceae Mesembryanthemum crystallinum 1 gene_24422
Amaranthaceae Atriplex hortensis 1 Ah032315
Amaranthaceae Salicornia bigelovii 2 Sbi_jg30023, Sbi_jg43462
Amaranthaceae Salicornia europaea 1 Seu_jg18441
Amaranthaceae Suaeda aralocaspica 1 GOSA_00004204
Amaranthaceae Suaeda glauca 2 Sgl66219, Sgl70535
Amaranthaceae Chenopodium album 4 gene:ENSEOMG00000014968, gene:ENSEOMG00000019608 ...
gene:ENSEOMG00000019972, gene:ENSEOMG00000048935
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.2AG0004540, CQ.Regalona.r1.2BG0005360
Anacardiaceae Pistacia vera 1 pistato.v30165730
Apiaceae Apium graveolens 2 Ag6G02939, Ag8G01163
Arecaceae Cocos nucifera 2 COCNU_02G017600, COCNU_16G001660
Arecaceae Phoenix dactylifera 2 gene-LOC103702563, gene-LOC103716443
Asparagaceae Asparagus officinalis 1 AsparagusV1_07.1826.V1.1
Asteraceae Flaveria trinervia 1 Ftri15G11643
Brassicaceae Arabidopsis thaliana 1 AT5G13530.1
Brassicaceae Eutrema salsugineum 1 Thhalv10012422m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp6g30490.v2.2
Brassicaceae Brassica nigra 1 BniB08g006380.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq05G0902, Ceq05G1607
Casuarinaceae Casuarina glauca 2 Cgl05G0914, Cgl05G1603
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno14g10300
Hydrocharitaceae Thalassia testudinum 1 gene.Thate02g01830
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-3156, nbisL1-mrna-7282
Nitrariaceae Nitraria sibirica 2 evm.TU.LG02.2014, evm.TU.LG09.736
Plantaginaceae Plantago ovata 1 Pov_00039394
Plumbaginaceae Limonium bicolor 2 Lb1G02391, Lb7G35419
Poaceae Echinochloa crus-galli 2 AH05.2599, CH05.2772
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0374510, gene-QOZ80_5BG0421810
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.1HG0064500.1
Poaceae Lolium multiflorum 2 gene-QYE76_013688, gene-QYE76_071995
Poaceae Oryza coarctata 2 Oco09G008750, Oco10G008900
Poaceae Oryza sativa 1 LOC_Os05g32570.1
Poaceae Paspalum vaginatum 1 gene-BS78_09G132900
Poaceae Puccinellia tenuiflora 1 Pt_Chr0505121
Poaceae Sporobolus alterniflorus 5 Chr01G021240, Chr12G016680, Chr12G016690, Chr18G008360 ...
Chr22G009270
Poaceae Thinopyrum elongatum 1 Tel1E01G405300
Poaceae Triticum dicoccoides 2 gene_TRIDC1AG036850, gene_TRIDC1BG041860
Poaceae Triticum aestivum 3 TraesCS1A02G245000.3, TraesCS1B02G256200.2 ...
TraesCS1D02G244900.2
Poaceae Zea mays 2 Zm00001eb287260_P002, Zm00001eb350870_P001
Poaceae Zoysia japonica 4 nbis-gene-12097, nbis-gene-14541, nbis-gene-14542 ...
nbis-gene-23743
Poaceae Zoysia macrostachya 1 Zma_g28181
Portulacaceae Portulaca oleracea 2 evm.TU.LG05.1021, evm.TU.LG25.319
Posidoniaceae Posidonia oceanica 1 gene.Posoc06g21000
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_18_RagTag.72
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-28491
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-1047
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-14067, nbisL1-mrna-14068
Rhizophoraceae Kandelia candel 1 evm.TU.utg000023l.289
Rhizophoraceae Kandelia obovata 1 Maker00019135
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-14989
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-21475
Salicaceae Populus euphratica 3 populus_peu01794, populus_peu04229, populus_peu04230
Solanaceae Lycium barbarum 1 gene-LOC132645371
Solanaceae Solanum chilense 1 SOLCI006813100
Solanaceae Solanum pennellii 1 gene-LOC107002366
Tamaricaceae Reaumuria soongarica 1 STRG.13741_chr05_-
Tamaricaceae Tamarix chinensis 1 TC01G3920
Zosteraceae Zostera marina 1 Zosma01g27350.v3.1
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