Basic Information
Locus ID:
gene:ENSEOMG00000013959
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 41744043 | 41756849 | + | gene:ENSEOMG00000013959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 76,179.68 Da | 51.50 | 84.22 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 1 | 98 | 2.59875E-13 | - |
| CDD | cd00159 | RhoGAP | 153 | 308 | 6.84986E-33 | - |
| Pfam | PF00169 | PH domain | 7 | 102 | 3.5E-12 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 153 | 296 | 2.1E-26 | IPR000198 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 153 | 346 | 1.67E-30 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 1 | 106 | 8.04E-16 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 1 | 104 | 7.4E-16 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 124 | 345 | 7.5E-38 | IPR008936 |
| SMART | SM00233 | PH_update | 1 | 105 | 1.6E-11 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 150 | 341 | 4.8E-22 | IPR000198 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 144 | 344 | 28.219446 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 1 | 103 | 15.6623 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 375 | - | - |
| Coils | Coil | Coil | 486 | 559 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24580.3 | - | 0 |
| RefSeq | XP_021740332.1 | rho GTPase-activating protein REN1-like [Chenopodium quinoa] | 0 |
| F4JQZ3 | Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana OX=3702 GN=REN1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MEH0 | Rho GTPase-activating protein REN1-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology