Basic Information
Locus ID:
gene:ENSEOMG00000013921
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 15 | 30780450 | 30782147 | - | gene:ENSEOMG00000013921 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 53,694.05 Da | 34.65 | 103.20 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 116 | 158 | 4.61745E-29 | - |
| Pfam | PF04564 | U-box domain | 112 | 182 | 2.3E-21 | IPR003613 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 239 | 278 | 5.6E-11 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 322 | 360 | 5.1E-6 | IPR000225 |
| SUPERFAMILY | SSF48371 | ARM repeat | 209 | 488 | 3.96E-50 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 110 | 187 | 4.71E-31 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 389 | 490 | 1.6E-14 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 282 | 388 | 2.8E-24 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 191 | 281 | 1.1E-12 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 112 | 185 | 5.5E-31 | IPR013083 |
| SMART | SM00185 | arm_5 | 403 | 443 | 98.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 280 | 320 | 0.38 | IPR000225 |
| SMART | SM00185 | arm_5 | 321 | 361 | 0.058 | IPR000225 |
| SMART | SM00185 | arm_5 | 239 | 279 | 3.3E-6 | IPR000225 |
| SMART | SM00504 | Ubox_2 | 115 | 178 | 3.2E-35 | IPR003613 |
| SMART | SM00185 | arm_5 | 362 | 402 | 80.0 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 250 | 292 | 14.1924 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 291 | 333 | 9.0474 | IPR000225 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 111 | 185 | 44.477947 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54850.1 | plant U-box 14. Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. | 0 |
| RefSeq | XP_021717676.1 | U-box domain-containing protein 14 [Chenopodium quinoa] | 0 |
| Q8VZ40 | U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NA48 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology