Basic Information
Locus ID:
gene:ENSEOMG00000013665
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
NTMC2T4.1
Description:
ntmc2t4,ntmc2type4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 46908831 | 46917106 | + | gene:ENSEOMG00000013665 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 54,690.16 Da | 29.91 | 103.24 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00030 | C2 | 266 | 362 | 4.54151E-28 | - |
| Pfam | PF00168 | C2 domain | 264 | 359 | 1.2E-21 | IPR000008 |
| Pfam | PF17047 | Synaptotagmin-like mitochondrial-lipid-binding domain | 68 | 248 | 2.9E-18 | IPR039010 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 264 | 393 | 6.29E-29 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 259 | 419 | 3.7E-31 | IPR035892 |
| SMART | SM00239 | C2_3c | 265 | 362 | 1.0E-20 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 247 | 365 | 20.875397 | IPR000008 |
| ProSiteProfiles | PS51847 | Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. | 66 | 249 | 23.556025 | IPR031468 |
| PRINTS | PR00360 | C2 domain signature | 328 | 336 | 5.0E-5 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 281 | 293 | 5.0E-5 | IPR000008 |
| PRINTS | PR00360 | C2 domain signature | 306 | 319 | 5.0E-5 | IPR000008 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 503 | - | - |
| Coils | Coil | Coil | 393 | 413 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61050.1 | Calcium-dependent lipid-binding (CaLB domain) family protein. | 0 |
| RefSeq | XP_021748091.1 | synaptotagmin-4-like [Chenopodium quinoa] | 0 |
| Q9LEX1 | Calcium-dependent lipid-binding protein OS=Arabidopsis thaliana OX=3702 GN=CLB PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RHY5 | Synaptotagmin-5 OS=Spinacia oleracea OX=3562 GN=SOVF_070370 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology