Basic Information
Locus ID:
gene:ENSEOMG00000013653
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 43879377 | 43882552 | + | gene:ENSEOMG00000013653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 67,623.42 Da | 45.35 | 71.40 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 188 | 316 | 1.47182E-36 | IPR033734 |
| CDD | cd09612 | Jacalin | 18 | 149 | 1.05116E-43 | IPR033734 |
| CDD | cd09612 | Jacalin | 449 | 580 | 6.13886E-43 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 449 | 580 | 3.1E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 188 | 316 | 5.0E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 18 | 149 | 2.5E-34 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 7 | 148 | 7.85E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 440 | 580 | 4.84E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 178 | 316 | 7.2E-36 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 436 | 580 | 2.5E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 149 | 2.2E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 169 | 316 | 2.2E-45 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 188 | 318 | 3.0E-35 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 449 | 581 | 3.1E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 18 | 150 | 9.1E-41 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 177 | 318 | 44.164593 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 7 | 150 | 49.295013 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 438 | 581 | 49.58577 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021759624.1 | uncharacterized protein LOC110724509 [Chenopodium quinoa] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LKG8 | Jacalin-related lectin 3-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology