Basic Information
Locus ID:
gene:ENSEOMG00000012869
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 16 | 458420 | 462181 | - | gene:ENSEOMG00000012869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.35 | 39,002.12 Da | 41.78 | 69.58 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 8 | 68 | 4.1E-11 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 7 | 79 | 3.14E-17 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 77 | 1.6E-17 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 71 | 16.141724 | IPR028889 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 114 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24640.2 | ubiquitin-specific protease 19. | 0 |
| RefSeq | XP_021755587.1 | ubiquitin carboxyl-terminal hydrolase 18-like [Chenopodium quinoa] | 0 |
| Q9SJA1 | Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LXU6 | Ubiquitin carboxyl-terminal hydrolase 18-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology